HOME DOWNLOAD CITATION HELP
Umass Logo PSB Logo
(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
For feedback on this map, please send email to:
 lutfu.yilmaz@umassmed.edu

Tryptophan degradation (?) Click title to reach WormFlux pathway page with a table of reactions.

See below for map legend.

See the bottom of this page for download options.

image/svg+xml 5htrp 5hoxindoa 5hoxindact srtn trp-L trypta id3acald ind3ac bas-1 tph-1 bas-1 | hdl-1 |tdc-1 amx-2 nadh, (2) h nad, h2o nh4, h2o2 h2o, o2 h co2 dhbpt thbpt nadh, (2) h nad, h2o h co2 h2o, o2 nh4, h2o2 o2 h2o for nadph, h, o2 h2o,nadp akg h2o ala-L o2 h co2 h2o, nad h, h2o, nadph (2) h, nadh nh4, nadp Lfmkynr Lkynr 4aphdob tdo-2 nkat-1 | nkat-3 kmo-1 | kmo-2 hLkynr 42A3HP24DB glu-L 3hanthrn cmusa am6sa amuco 2oxoadp kynu-1 haao-1 acsd-1 alh-10 KEGG KEGG KEGG CYTOSOL MITOCHONDRIA amx-2 alh-2 | alh-4 |alh-11 | alh-12 |gad-3 thbpt thbpt4acam alh-2 | alh-4 |alh-11 | alh-12 afmd-1 cinnavalininate thbpt dhbpt (2) o2s (4) o2 o2, h h2o ctl-1 | ctl-2 | ctl-3 ? quln h, h2o spontaneous h2o ala-L h2o for nformanth anth afmd-1 h h2o h kynu-1 ala-L kynu-1 nkat-1 | nkat-3 KEGG h ? alh-1 | alh-2 |alh-4 | alh-9 id3acald ind3ac nadh, (2) h nad, h2o o2 o2 h2o h h (2) h2o2, (4) h EXTRACELLULARSPACE 5hoxindoa ind3ac Folate biosynthesis ROSmetabolism Nicotinate and nicotinamide metabolism Glutamate/glutaminemetabolism Other

image/svg+xml Transportable in both ways Number of pathway connections None 1 2 3 4 > 4 Transportability Enzymatic reaction Multiple transports Transport Reactions Not in iCEL1314 Transportable between cytosoland extracellular space Transportable between cytosoland mitochondria gene Non-enzymatic reaction n/a Metabolites metabolite metabolite Main metabolite Co-reactant metabolite Not in iCEL1314

Download map (?) Select format from the drop-down menu on the right and then click to download the map.