HOME DOWNLOAD CITATION HELP
Umass Logo PSB Logo
(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
Metabolite Overview
Abbreviation ..................................................... : glyb
Name ..................................................... : Glycine betaine, etc.Betaine, Trimethylaminoacetate, N,N,N-Trimethylglycine, Trimethylammonioacetate
Model ID ..................................................... : C00719
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : C00719
Formula ..................................................... : C5H11NO2
Charge ..................................................... : 0
Localization ..................................................... : Extracellular, Cytosol, Mitochondria
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : glyb
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Glycerophospholipid metabolism (c,e,m)
Comments
ERROR
Reactions
ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses. 		Pathway
RM02565Name: p-Cumic alcohol:NADP+ oxidoreductase
Type: Regular
Location: Mitochondria
KEGG ID: R02565

click to see details on this item
1.2.1.8Name: betaine-aldehyde dehydrogenase
Other names: betaine aldehyde oxidase, BADH, betaine aldehyde dehydrogenase, BetB

click to see details on this item
[m] : betaldName: Betaine aldehyde
Formula: C5H12NO
Charge: 1




click to see details on this item + h2oName: H2O
Formula: H2O
Charge: 0




click to see details on this item + nadName: Nicotinamide adenine dinucleotide
Formula: C21H26N7O14P2
Charge: -1




click to see details on this item
glybName: Glycine betaine
Formula: C5H11NO2
Charge: 0




click to see details on this item + (2) hName: H+
Formula: H
Charge: 1




click to see details on this item + nadhName: Nicotinamide adenine dinucleotide - reduced
Formula: C21H27N7O14P2
Charge: -2




click to see details on this item
alh-9
Glycerophospholipid metabolism
RM02566Name: p-Cumic alcohol:NADP+ oxidoreductase
Type: Regular
Location: Mitochondria
KEGG ID: R02566

click to see details on this item
1.2.1.8Name: betaine-aldehyde dehydrogenase
Other names: betaine aldehyde oxidase, BADH, betaine aldehyde dehydrogenase, BetB

click to see details on this item
[m] : betaldName: Betaine aldehyde
Formula: C5H12NO
Charge: 1




click to see details on this item + nadpName: Nicotinamide adenine dinucleotide phosphate
Formula: C21H25N7O17P3
Charge: -3




click to see details on this item + h2oName: H2O
Formula: H2O
Charge: 0




click to see details on this item
glybName: Glycine betaine
Formula: C5H11NO2
Charge: 0




click to see details on this item + nadphName: Nicotinamide adenine dinucleotide phosphate - reduced
Formula: C21H26N7O17P3
Charge: -4




click to see details on this item + (2.0) hName: H+
Formula: H
Charge: 1




click to see details on this item
alh-9
Glycerophospholipid metabolism
TCE0752Name: Glycine betaine and Sodium transport
Type: Transport
Location: Cytosol, Extracellular
KEGG ID: NA

click to see details on this item
Not applicable
glybName: Glycine betaine
Formula: C5H11NO2
Charge: 0




click to see details on this item[e] + (2.0) na1Name: Sodium
Formula: Na
Charge: 1




click to see details on this item[e]
glybName: Glycine betaine
Formula: C5H11NO2
Charge: 0




click to see details on this item[c] + (2.0) na1Name: Sodium
Formula: Na
Charge: 1




click to see details on this item[c]
Not determined
Transport
TCM0106Name: Glycine betaine transport
Type: Transport
Location: Cytosol, Mitochondria
KEGG ID: NA

click to see details on this item
Not applicable
glybName: Glycine betaine
Formula: C5H11NO2
Charge: 0




click to see details on this item[m]
glybName: Glycine betaine
Formula: C5H11NO2
Charge: 0




click to see details on this item[c]
Not determined
Transport
EX00719Name: Glycine betaine exchange
Type: Exchange
Location: Extracellular
KEGG ID: NA

click to see details on this item
Not applicable
glybName: Glycine betaine
Formula: C5H11NO2
Charge: 0




click to see details on this item[e]
Not applicable
Exchange with the environment
The information and tools provided in this website are to be used for academic purposes only. Potential users of the flux analysis tools (FBA button in the vertical menu) are asked to show proof of working at an academic institution during the creation of their accounts. These mathematical tools are powered by the commercial software Gurobi.