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Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
Metabolite Overview
Abbreviation ..................................................... : selnt
Name ..................................................... : Selenite
Model ID ..................................................... : C05684
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : C05684
Formula ..................................................... : O3Se
Charge ..................................................... : -2
Localization ..................................................... : Extracellular, Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : Not available
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Selenocompound metabolism (c,e)
Comments
  • Charge based on MetaCyc.

    • Reactions
    ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

    I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
    & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

    If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.     		Pathway
    RC03596Name: Hydrogen selenide:NADP+ oxidoreductase
    Type: Regular
    Location: Cytosol
    KEGG ID: R03596

    click to see details on this item
    1.8.1.9Name: thioredoxin-disulfide reductase
    Other names: NADP-thioredoxin reductase, NADPH-thioredoxin reductase, thioredoxin reductase (NADPH), NADPH2:oxidized thioredoxin oxidoreductase

    click to see details on this item
    [c] : selnName: Selenide
    Formula: HSe
    Charge: -1




    click to see details on this item     + (3) nadpName: Nicotinamide adenine dinucleotide phosphate
    Formula: C21H25N7O17P3
    Charge: -3




    click to see details on this item     + (3) h2oName: H2O
    Formula: H2O
    Charge: 0




    click to see details on this item
    selntName: Selenite
    Formula: O3Se
    Charge: -2




    click to see details on this item     + (3) nadphName: Nicotinamide adenine dinucleotide phosphate - reduced
    Formula: C21H26N7O17P3
    Charge: -4




    click to see details on this item     + (4) hName: H+
    Formula: H
    Charge: 1




    click to see details on this item
    trxr-1
    Selenocompound metabolism
    RC04940Name: 3'-Phosphoadenylylselenate + NADPH <=> Adenosine 3',5'-bisphosphate + Selenite + NADP+ + H+
    Type: Regular
    Location: Cytosol
    KEGG ID: R04940

    click to see details on this item
    Unknown
    [c] : 3padselName: 3'-Phosphoadenylylselenate
    Formula: C10H11N5O13P2Se
    Charge: -4




    click to see details on this item     + nadphName: Nicotinamide adenine dinucleotide phosphate - reduced
    Formula: C21H26N7O17P3
    Charge: -4




    click to see details on this item
    papName: "Adenosine 3',5'-bisphosphate"
    Formula: C10H11N5O10P2
    Charge: -4




    click to see details on this item     + selntName: Selenite
    Formula: O3Se
    Charge: -2




    click to see details on this item     + nadpName: Nicotinamide adenine dinucleotide phosphate
    Formula: C21H25N7O17P3
    Charge: -3




    click to see details on this item     + hName: H+
    Formula: H
    Charge: 1




    click to see details on this item
    Unknown
    Selenocompound metabolism
    TCE5066Name: selenite transport
    Type: Transport
    Location: Cytosol, Extracellular
    KEGG ID: NA

    click to see details on this item
    Not applicable
    selntName: Selenite
    Formula: O3Se
    Charge: -2




    click to see details on this item    [c]
    selntName: Selenite
    Formula: O3Se
    Charge: -2




    click to see details on this item    [e]
    To be determined
    Transport
    EX05684Name: Selenite exchange
    Type: Exchange
    Location: Extracellular
    KEGG ID: NA

    click to see details on this item
    Not applicable
    selntName: Selenite
    Formula: O3Se
    Charge: -2




    click to see details on this item    [e]
    Not applicable
    Exchange with the environment
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