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  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
Reaction Overview
Model ID ..................................................... : RCC0231
Name ..................................................... : ascr-coa (ascr1) hydrolysis
Type (?)

One of the following categories:

Regular: Regular enzymatic reactions that do not fit in any special categories below
Biomass: Reactions that represent the assembly of the worm biomass
Degradation: Reactions that represent the degradation of the bacterial diet
Demand: Reactions that consume products in the compartment that they are produced
Sink: Reactions that can not only consume but also provide a metabolite in a particular compartment (e.g., storage reactions)
Transport: Reactions that transport material between different compartments
Exchange: Reactions that exchange metabolites with the environment
..................................................... 		: Regular
KEGG ID (?) Reactions in KEGG database that match this reaction.

Multiple IDs typically indicate that the model reaction is a merged reaction. ..................................................... 		: Not available
Is in PRIME model (?) Indicates whether the reaction is part of the PRIME model, which is the basis (minimum model) for proper biomass/energy generation and compartmentalization. ..................................................... : No
Reversibility ..................................................... : Irreversible
Localization ..................................................... : Cytosol
Other annotation ..................................................... : See tabular representation below.
Comments
  • See note #37.

    • ► | Localization scores (click to view)▼ | Localization scores (click to hide)
    Not available
    ► | Reversibility scores (click to view)▼ | Reversibility scores (click to hide)
    Not available
    Reaction
    ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

    I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
    & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

    If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.     		Pathway
    RCC0231Name: ascr-coa (ascr1) hydrolysis
    Type: Regular
    Location: Cytosol
    KEGG ID: NA

    click to see details on this item
    Not applicable
    [c] : ascr1coaName: ascaryl (ascr1) coa
    Formula: C34H54N7O21P3S
    Charge: -4




    click to see details on this item     + h2oName: H2O
    Formula: H2O
    Charge: 0




    click to see details on this item
    ascr1Name: Ascaroside 1
    Formula: C13H23O6
    Charge: -1




    click to see details on this item     + coaName: Coenzyme A
    Formula: C21H32N7O16P3S
    Charge: -4




    click to see details on this item     + hName: H+
    Formula: H
    Charge: 1




    click to see details on this item
    Not determined
    Ascaroside biosynthesis
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