Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

Metabolite Overview

Abbreviation .....................................................	:	utp
Name .....................................................	:	UTP, etc.Uridine 5'-triphosphate, Uridine triphosphate
Model ID .....................................................	:	C00075
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C00075
Formula .....................................................	:	C9H11N2O15P3
Charge .....................................................	:	-4
Localization .....................................................	:	Extracellular, Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	utp
Other associations .....................................................	:	See reaction table below (9 reactions in total)
In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Represented in 4 maps... Amino sugar and nucleotide sugar metabolism (c) Pentose and glucuronate interconversions (c) Pyrimidine metabolism (c) Starch and sucrose metabolism (c)   Go to map

iCEL1314

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&). I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme). & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme). If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RC00416Name: UTP:N-acetyl-alpha-D-glucosamine-1-phosphate uridylyltransferase Type: Regular Location: Cytosol KEGG ID: R00416 click to see details on this item	2.7.7.23Name: UDP-N-acetylglucosamine diphosphorylase Other names: UDP-N-acetylglucosamine pyrophosphorylase, uridine diphosphoacetylglucosamine pyrophosphorylase, UTP:2-acetamido-2-deoxy-alpha-D-glucose-1-phosphate uridylyltransferase, UDP-GlcNAc pyrophosphorylase, GlmU uridylyltransferase, Acetylglucosamine 1-phosphate uridylyltransferase, UDP-acetylglucosamine pyrophosphorylase, uridine diphosphate-N-acetylglucosamine pyrophosphorylase, uridine diphosphoacetylglucosamine phosphorylase, acetylglucosamine 1-phosphate uridylyltransferase click to see details on this item	[c] : acgam1pName: N-Acetyl-D-glucosamine 1-phosphate Formula: C8H14NO9P Charge: -2 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item		ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item + uacgamName: UDP-N-acetyl-D-glucosamine Formula: C17H25N3O17P2 Charge: -2 click to see details on this item	C36A4.4	Amino sugar and nucleotide sugar metabolism
RC00289Name: UTP:alpha-D-glucose-1-phosphate uridylyltransferase Type: Regular Location: Cytosol KEGG ID: R00289 click to see details on this item	2.7.7.9Name: UTP---glucose-1-phosphate uridylyltransferase Other names: UDP glucose pyrophosphorylase, glucose-1-phosphate uridylyltransferase, UDPG phosphorylase, UDPG pyrophosphorylase, uridine 5'-diphosphoglucose pyrophosphorylase, uridine diphosphoglucose pyrophosphorylase, uridine diphosphate-D-glucose pyrophosphorylase, uridine-diphosphate glucose pyrophosphorylase click to see details on this item	[c] : g1pName: D-Glucose 1-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item		ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item + udpgName: UDPglucose Formula: C15H22N2O17P2 Charge: -2 click to see details on this item	D1005.2 | K08E3.5	Amino sugar and nucleotide sugar metabolism
RC00156Name: ATP:UDP phosphotransferase Type: Regular Location: Cytosol KEGG ID: R00156 click to see details on this item	2.7.4.6Name: nucleoside-diphosphate kinase Other names: nucleoside 5'-diphosphate kinase, nucleoside diphosphate (UDP) kinase, nucleoside diphosphokinase, nucleotide phosphate kinase, UDP kinase, uridine diphosphate kinase click to see details on this item	[c] : atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + udpName: UDP Formula: C9H11N2O12P2 Charge: -3 click to see details on this item		adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item	R05G6.5 | Y48G8AL.15 | ndk-1	Pyrimidine metabolism
RC00662Name: Uridine triphosphate pyrophosphohydrolase Type: Regular Location: Cytosol KEGG ID: R00662 click to see details on this item	3.6.1.19Name: nucleoside-triphosphate diphosphatase Other names: nucleoside-triphosphate pyrophosphatase click to see details on this item	[c] : h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item		hName: H+ Formula: H Charge: 1 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item + umpName: UMP Formula: C9H11N2O9P Charge: -2 click to see details on this item	hap-1	Pyrimidine metabolism
RC00571Name: UTP:ammonia ligase (ADP-forming) Type: Regular Location: Cytosol KEGG ID: R00571 click to see details on this item	6.3.4.2Name: CTP synthase (glutamine hydrolysing) Other names: UTP---ammonia ligase, cytidine triphosphate synthetase, uridine triphosphate aminase, cytidine 5'-triphosphate synthetase, CTPS (gene name), pyrG (gene name), CTP synthase, UTP:ammonia ligase (ADP-forming) click to see details on this item	[c] : atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + nh4Name: Ammonium Formula: H4N Charge: 1 click to see details on this item + utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item		adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + ctpName: CTP Formula: C9H12N3O14P3 Charge: -4 click to see details on this item + (2) hName: H+ Formula: H Charge: 1 click to see details on this item + piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item	ctps-1	Pyrimidine metabolism
RC00573Name: UTP:L-glutamine amido-ligase (ADP-forming) Type: Regular Location: Cytosol KEGG ID: R00573 click to see details on this item	6.3.4.2Name: CTP synthase (glutamine hydrolysing) Other names: UTP---ammonia ligase, cytidine triphosphate synthetase, uridine triphosphate aminase, cytidine 5'-triphosphate synthetase, CTPS (gene name), pyrG (gene name), CTP synthase, UTP:ammonia ligase (ADP-forming) click to see details on this item	[c] : atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + gln-LName: L-Glutamine Formula: C5H10N2O3 Charge: 0 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item		adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + ctpName: CTP Formula: C9H12N3O14P3 Charge: -4 click to see details on this item + glu-LName: L-Glutamate Formula: C5H8NO4 Charge: -1 click to see details on this item + (2) hName: H+ Formula: H Charge: 1 click to see details on this item + piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item	ctps-1	Pyrimidine metabolism
BIO0003Name: RNA synthesis Type: Biomass Location: Cytosol KEGG ID: R00444;R00435 click to see details on this item	2.7.7.19Name: polynucleotide adenylyltransferase Other names: NTP polymerase, RNA adenylating enzyme, AMP polynucleotidylexotransferase, ATP-polynucleotide adenylyltransferase, ATP:polynucleotidylexotransferase, poly(A) polymerase, poly(A) synthetase, polyadenylate nucleotidyltransferase, polyadenylate polymerase, polyadenylate synthetase, polyadenylic acid polymerase, polyadenylic polymerase, terminal riboadenylate transferase, poly(A) hydrolase, RNA formation factors, PF1, adenosine triphosphate:ribonucleic acid adenylyltransferase click to see details on this item 2.7.7.6Name: DNA-directed RNA polymerase Other names: RNA polymerase, RNA nucleotidyltransferase (DNA-directed), RNA polymerase I, RNA polymerase II, RNA polymerase III, C RNA formation factors, deoxyribonucleic acid-dependent ribonucleic acid polymerase, DNA-dependent ribonucleate nucleotidyltransferase, DNA-dependent RNA nucleotidyltransferase, DNA-dependent RNA polymerase, ribonucleate nucleotidyltransferase, ribonucleate polymerase, C ribonucleic acid formation factors, ribonucleic acid nucleotidyltransferase, ribonucleic acid polymerase, ribonucleic acid transcriptase, ribonucleic polymerase, ribonucleic transcriptase, RNA nucleotidyltransferase, RNA transcriptase, transcriptase, RNA nucleotidyltransferase I click to see details on this item	[c] : (0.639534) atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + (0.228426) ctpName: CTP Formula: C9H12N3O14P3 Charge: -4 click to see details on this item + (0.233503) gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + (0.304569) utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item + (0.406032) h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		RNAName: RNA (biomass) Formula: X Charge: 0 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item + (0.406032) adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + (0.406032) piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item + (0.406032) hName: H+ Formula: H Charge: 1 click to see details on this item	[(F43G6.5 | T15H9.6 | pap-1) & gld-2 & gld-4] & (rpoa-1 & rpoa-2 & ama-1 & rpb-2 & rpc-1 & rpc-2 & rpom-1 & rpb-3 & rpb-4 & rpb-5 & rpb-6 & rpb-7 & rpb-8 & rpb-9 & rpb-10 & rpb-11 & rpc-11 & rpoa-12 & rpb-12 & rpac-19 & rpac-40 & rpc-25 & let-611 & Y47G6A.9 & W09C3.4 & F26E4.4 & W06E11.1)	Biomass assembly
TCE5302Name: UTP transport Type: Transport Location: Cytosol, Extracellular KEGG ID: NA click to see details on this item	Not applicable	utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item[c]		utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item[e]	Not determined	Transport
EX00075Name: UTP exchange Type: Exchange Location: Extracellular KEGG ID: NA click to see details on this item	Not applicable	utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item[e]			Not applicable	Exchange with the environment

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