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(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
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lutfu.yilmaz@umassmed.edu

Collagen biosynthesis (?) Click title to reach WormFlux pathway page with a table of reactions.

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image/svg+xml pcollg5hlys pcollg4hpro pcollg_rest pcollglys pcollgpro o2 co2 succ co2 let-268 C14E2.4 | Y43F8B.19 | dpy-18 | phy-2 | phy-3 | phy-4 n/a pcollg_mod (3) pcollg_diS pcollg_tri ? pdi-1 | pdi-2 | pdi-3 | pdi-6 | C14B9.2 | M04D5.1 | Y49E10.4 | ZK973.11 tropcollg_rest (2) tropcollgtyr (2) tropcollgtyrX collg dpy-31 |bli-4 bli-3 n/a nadph, h, o2 nadp, (2) h2o o2 akg Biomassassembly Procollagenbiosynthesis

image/svg+xml Transportable in both ways Number of pathway connections None 1 2 3 4 > 4 Transportability Enzymatic reaction Multiple transports Transport Reactions Not in iCEL1314 Transportable between cytosoland extracellular space Transportable between cytosoland mitochondria gene Non-enzymatic reaction n/a Metabolites metabolite metabolite Main metabolite Co-reactant metabolite Not in iCEL1314

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